|
/tool | Accept: text/uri-list | List OpenEBench tools identifiers. |
|
/tool | Accept: application/json | List OpenEBench collection of tools. |
|
/tool | Accept: application/ld+json | List OpenEBench collection of tools as an OWL 2 ontology. |
|
/tool/{id} | Accept: application/json |
Get OpenEBench tool by its 'common' identifier.
Returns an abstract tool object or the first matched if id is prefixed or has a version.
|
|
/tool/{id}/{type} | Accept: application/json |
Get OpenEBench tool by its identifier and type (ex: '/tool/biotools:pmut:2017/web').
|
|
/tool/{id}/{type}/{host}{path} | Accept: application/json |
Get either entire OpenEBench tool document or its subdocument.
The optional 'path' is a JSON path for the subdocument to be returned.
|
|
/tool/{id}/{type} | Accept: application/ld+json |
Get OpenEBench JSON-LD OWL 2 tool description. |
|
/tool/{id} | |
Insert OpenEBench tool into the database. |
|
/tool | |
Update OpenEBench tools in the database. Endpoint accepts an array of tools.
The identifiers are taken from the '@id' property of each tool. MongoDB 'upsert' is used for merging.
|
|
/tool | |
Update OpenEBench tools in the database merging them vith submitted documents.
Endpoint accepts an array of tools. The identifiers are taken from the '@id' property of each tool.
|
|
/tool/{id} | |
Update OpenEBench tool by merging its properties vith submitted document. |
|
/tool/{id}/{type}/{host}{path} | |
Update either entire OpenEBench json tool document (no 'path' set) or subdocument defined by json path.
|
|
|
/metrics | Accept: application/json | List OpenEBench tools' metrics. |
|
/metrics/{id} | Accept: application/json | Get OpenEBench tool's metrics. |
|
/metrics/{id}{path} | Accept: application/json | Get specific OpenEBench tool's metrics defined by json path. |
|
/metrics/{id} | |
Insert OpenEBench tool's metrics into the database. |
|
/metrics | |
Update OpenEBench tools' metrics in the database. Endpoint accepts an array of metrics.
The identifiers are taken from the '@id' property of each metrics. MongoDB 'upsert' is used for merging.
|
|
/metrics | |
Update OpenEBench tools' metrics in the database merging them vith submitted documents.
Endpoint accepts an array of metrics. The identifiers are taken from the '@id' property of each metrics.
|
|
/metrics/{id} | |
Update OpenEBench metrics by merging its properties vith submitted document. |
|
/metrics/{id}/{type}/{host}{path} | |
Update either entire OpenEBench json metrics document (no 'path' set) or subdocument defined by json path.
|
|
|
/alambique | Accept: application/json | List OpenEBench alambique collection. |
|
/alambique/{id} | Accept: application/json |
Get first matched OpenEBench alambique object. |
|
/alambique/{id} | |
Insert OpenEBench alambique object into the database. |
|
/alambique | |
Update OpenEBench alambique objects in the database. Endpoint accepts an array of objects.
The identifiers are taken from the '@id' property of each object. MongoDB 'upsert' is used for merging.
|
|
/alambique | |
Update OpenEBench alambique objects in the database merging them vith submitted documents.
Endpoint accepts an array of objects. The identifiers are taken from the '@id' property of each object.
|
|
/alambique/{id} | |
Update OpenEBench alambique object by merging its properties vith submitted document. |
|
|
/tool/log/{id}/{type}/{host}{path} | Accept: application/json |
Get historical changes of tool's property defined by the JSON path |
|
/metrics/log/{id}/{type}/{host}{path} | Accept: application/json |
Get historical changes of metrics's property defined by the JSON path |
|
|
/tool/meta | Accept: application/json |
List all OpenEBench tools' properties paths |
|
/tool/meta/{id} | Accept: application/json |
Get OpenEBench tool's properties paths |
|
|
/rest/edam/search | Accept: application/json |
Search for OpenEBench tools. Returns a sorted by the identifier list of matched tools. |
|
/rest/edam/aggregate | Accept: application/json |
Search for OpenEBench tools. Unlike the 'search' endpoint returns aggregated by tool's identifier result. |
|
/rest/edam/tool | Accept: application/json |
Get OpenEBench tools EDAM semantics. |
|
/rest/edam/tool/{id} | Accept: application/json |
Get EDAM semantics for the OpenEBanch tool |
|
/rest/edam/tool/search?{text} | Accept: application/json |
Search for OpenEBench tools by free text found in EDAM semantic terms. |
|
/rest/edam/description?{term} | Accept: application/json |
Get EDAM term description. |
|
|
/rest/tools/statistics | Accept: application/json |
Get basic statistics about the number of tools properties in the database. |
|
/rest/metrics/statistics | Accept: application/json |
Get basic statistics about the number of metrics properties in the database. |
|
/rest/metrics/availability/{id} | Accept: application/json |
Get tool's homepage availability metrics. |